diff --git a/.storkit/work/1_backlog/372_story_scaffold_auto_detects_tech_stack_and_configures_script_test.md b/.storkit/work/1_backlog/372_story_scaffold_auto_detects_tech_stack_and_configures_script_test.md
deleted file mode 100644
index 11272c1..0000000
--- a/.storkit/work/1_backlog/372_story_scaffold_auto_detects_tech_stack_and_configures_script_test.md
+++ /dev/null
@@ -1,24 +0,0 @@
----
-name: "Scaffold auto-detects tech stack and configures script/test"
----
-
-# Story 372: Scaffold auto-detects tech stack and configures script/test
-
-## User Story
-
-As a user setting up a new project with storkit, I want the scaffold to detect my project's tech stack and generate a working `script/test` automatically, so that agents can run tests immediately without manual configuration.
-
-## Acceptance Criteria
-
-- [ ] Scaffold detects Go projects (go.mod) and adds `go test ./...` to script/test
-- [ ] Scaffold detects Node.js projects (package.json) and adds `npm test` to script/test
-- [ ] Scaffold detects Rust projects (Cargo.toml) and adds `cargo test` to script/test
-- [ ] Scaffold detects Python projects (pyproject.toml or requirements.txt) and adds `pytest` to script/test
-- [ ] Scaffold handles multi-stack projects (e.g. Go + Next.js) by combining the relevant test commands
-- [ ] project.toml component entries are generated to match detected tech stack
-- [ ] Falls back to the generic 'No tests configured' stub if no known stack is detected
-- [ ] Coder agent prompt includes instruction to configure `script/test` for the project's test framework if it still contains the generic stub
-
-## Out of Scope
-
-- TBD
diff --git a/.storkit/work/1_backlog/373_bug_scaffold_gitignore_missing_transient_pipeline_stage_directories.md b/.storkit/work/5_done/373_bug_scaffold_gitignore_missing_transient_pipeline_stage_directories.md
similarity index 100%
rename from .storkit/work/1_backlog/373_bug_scaffold_gitignore_missing_transient_pipeline_stage_directories.md
rename to .storkit/work/5_done/373_bug_scaffold_gitignore_missing_transient_pipeline_stage_directories.md
diff --git a/server/src/io/fs.rs b/server/src/io/fs.rs
index 7b32557..1557bf4 100644
--- a/server/src/io/fs.rs
+++ b/server/src/io/fs.rs
@@ -332,6 +332,8 @@ fn write_story_kit_gitignore(root: &Path) -> Result<(), String> {
         "work/2_current/",
         "work/3_qa/",
         "work/4_merge/",
+        "logs/",
+        "token_usage.jsonl",
     ];
 
     let gitignore_path = root.join(".storkit").join(".gitignore");