After story 871 the `agent` pin lives in the typed CRDT register
(`PipelineItemView.agent`), not the YAML front matter — the YAML
mutation was removed at the same time. Both spawn-resolution paths
(`auto_assign::story_checks::read_story_front_matter_agent` and
`start::validation::read_front_matter_agent`) still read only YAML
via parse_front_matter, which returns None for any story whose pin
was set via the post-871 typed setter. The spawn then falls back to
"first available coder," silently downgrading opus-pinned stories to
the first available sonnet — which is why 855/864/866 kept hitting the
80-turn watchdog limit despite the user's explicit opus pin.
Now: both paths consult `crdt_state::read_item()` first and use
`view.agent` if non-empty. YAML parsing remains as a fallback so older
stories whose CRDT entry doesn't yet have the field still resolve.
Adds a regression test that seeds an item with empty YAML, sets the
typed CRDT register via `set_agent`, and asserts
`read_story_front_matter_agent` returns the CRDT value.
The merge_jobs cleanup encoded the server's pid in the CRDT and checked
`kill(pid, 0)` to decide whether a "running" entry was stale. Two problems:
1. The cleanup runs *inside* the server, so checking whether the
server's own pid is alive is tautological — kill(self_pid, 0)
always succeeds.
2. `rebuild_and_restart` does an `execve()` re-exec, which keeps the
same pid. After re-exec, merge_jobs from the previous server
instance still encode "the current pid" — so the cleanup never
fires, and stories like 799/800 sit forever with status="running"
while no actual merge runs.
Switch to a per-process server-start-time captured lazily in a
`OnceLock<f64>` (reset by execve, so the new instance sees a fresh
boot-time). A merge_job's recorded start-time < current boot-time means
it came from a previous instance: stale, delete it.
Legacy pid-encoded entries decode to None and are also treated as stale.
MergeJob.pid → MergeJob.server_start_time. Tests updated.
claude CLI 2.1.97 strictly enforces that --include-partial-messages
requires --print/-p to be set. The resume path skipped -p when the
prompt was empty (which is the common case on respawns when there's
no fresh failure context to inject), so the spawned claude process
saw `--resume <sid> ... --include-partial-messages` without -p and
exited with code 1: "include-partial-messages requires --print and
--output-format=stream-json".
Net effect: every coder respawn with prior_sessions > 0 and empty
prompt was failing immediately, looking exactly like a rate-limit
(empty agent log, zero tool calls). 819 hit retry-limit (4/3) and
got marked blocked because of this — not because of any actual code
or rate-limit issue.
Fix: always pass `-p <prompt>` on resume, even with empty prompt.
server/src/agents/pool/lifecycle.rs and server/src/chat/transport/matrix/notifications.rs were untracked leftovers from an abandoned WIP stash that 'git add -A' picked up. Neither is declared as a mod anywhere — they're dangling code that doesn't get compiled but pollutes the tree.
The 13-file refactor pass (commits db00a5d4 through eca15b4e) introduced
~89 clippy errors and 38 cargo fmt issues — every agent in every worktree
hit them on script/test, burning their turn budget on cleanup before doing
real story work. This is the silent kill behind 644, 652, 655, 664, 667
all hitting watchdog limits this round.
Changes:
- cargo fmt --all across 37 files (formatting normalisation only)
- #![allow(unused_imports, dead_code)] on 24 split modules where the
python-script splitter imported liberally to be safe; tighter cleanup
per-import will happen as agents touch each module
- Removed truly-dead re-exports (cleanup_merge_workspace, slog_warn from
http/mcp/mod.rs, CliArgs/print_help from main.rs)
- Prefixed _auth_msg in crdt_sync/server.rs (handshake helper return is
bound but not consumed)
- Converted dangling /// doc block in crdt_sync/mod.rs to //! so it
attaches to the module
- Removed empty lines after doc comments in 4 spots (clippy lint)
All 2636 tests pass; clippy --all-targets -- -D warnings clean.
dave